Multi_Atlas

• What does it do?
• Requirements
• Resources *

OUTLOG - STDOUT and STDERR from the process on the grid

PBS - The DRMAA compliant batch script to run the job

PDF - The output PDF file for determining QA status

SNAPSHOTS - Thumbnail of the first page of the PDF resource for viewing on XNAT

MNI

MNI_SEG

SEG

VOL_TXT

OUT_ZIP

MATLAB

• References
• Version History

<revision> <name> <date> <lines changed>

r2960 | bdb | 2015-07-06 10:34:37 -0500 (Mon, 06 Jul 2015) | 1 line

Add suffix_proc option for dax 0.3.1, also change vX.X.X to vX_X_X

r2655 | yben | 2015-05-11 09:02:40 -0500 (Mon, 11 May 2015) | 1 line

Switching Modules/Processors/spiders for the version 0.3.0 of dax package (generic functions build in dax)

r1992 | yben | 2014-10-16 12:46:53 -0500 (Thu, 16 Oct 2014) | 2 lines

Removing MASIMATLAB_PATH called from dax and instead getting path from VUIIS_path_settings.py in processors/ Adding all the path to processors/VUIIS_path_settings.py for each imaging software used.

r1979 | yben | 2014-10-10 15:07:51 -0500 (Fri, 10 Oct 2014) | 2 lines

Adding “-singleCompThread” to every matlab called from regular spiders. Fixing bedpost problem (using fa.nii instead of dti)

r1903 | yben | 2014-08-15 11:42:56 -0500 (Fri, 15 Aug 2014) | 2 lines

Final commit to work with the new package dax. Fix some imports for modules/spiders/processors/Xnat_tools (fs)

r1901 | yben | 2014-08-15 09:05:31 -0500 (Fri, 15 Aug 2014) | 4 lines

Important Commit: 1) Adding new spiders using the new template 2) Switching old spiders to new template 3) Using new package dax

r1059 | yben | 2013-11-18 14:29:48 -0600 (Mon, 18 Nov 2013) | 1 line

fixing download error function name

r1056 | yben | 2013-11-15 15:32:28 -0600 (Fri, 15 Nov 2013) | 1 line

Fixing the fix to go from Spider.py to XnatUtils

r1053 | yben | 2013-11-15 14:39:19 -0600 (Fri, 15 Nov 2013) | 1 line

Copying the Spider_Multi_Atlas to the spiders folder

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