SCFusion_v3_0_0

• What does it do?
• Requirements
• Resources

OUTLOG - STDOUT and STDERR from the process on the grid

PBS - The DRMAA compliant batch script to run the job

PDF - The output PDF file for determining QA status

SNAPSHOTS - Thumbnail of the first page of the PDF resource for viewing on XNAT

init -

info -

aasmseg -

jlfseg -

map -

QA -

SEG -

STATS -

MATLAB -

• References
• Version History

<revision> <name> <date> <lines changed>

r4052 | damons | 2016-01-05 14:00:26 -0600 (Tue, 05 Jan 2016) | 1 line

switch to untouch since we just need to know size

r4050 | damons | 2016-01-05 13:36:22 -0600 (Tue, 05 Jan 2016) | 1 line

dont gunzip

r4049 | damons | 2016-01-05 13:28:43 -0600 (Tue, 05 Jan 2016) | 1 line

remove unused arg and re-route the data_dir which is apparently the input directory

r4048 | damons | 2016-01-04 16:08:47 -0600 (Mon, 04 Jan 2016) | 1 line

new scv3 spider using zhoubing’s magic

r3983 | damons | 2015-12-07 10:19:26 -0600 (Mon, 07 Dec 2015) | 1 line

paths are not intelligentaly joined. hard coding as a bandaid

r3733 | damons | 2015-11-02 08:29:50 -0600 (Mon, 02 Nov 2015) | 1 line

i got lied to. atlases are not in masimatlab

r3732 | damons | 2015-11-02 08:25:21 -0600 (Mon, 02 Nov 2015) | 1 line

toast the directory if it runs on the same node twice

r3728 | damons | 2015-10-31 11:41:46 -0500 (Sat, 31 Oct 2015) | 1 line

needs data_dir for pdf

r3726 | damons | 2015-10-31 11:14:42 -0500 (Sat, 31 Oct 2015) | 1 line

string formatting hell

r3725 | damons | 2015-10-31 11:08:44 -0500 (Sat, 31 Oct 2015) | 1 line

outputs not done, but everything else looks ok

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