dtiQA_Multi

• What does it do?
• Requirements
• Resources *

OUTLOG - STDOUT and STDERR from the process on the grid

PBS - The DRMAA compliant batch script to run the job

PDF - The output PDF file for determining QA status

SNAPSHOTS - Thumbnail of the first page of the PDF resource for viewing on XNAT

• References
• Version History

<revision> <name> <date> <lines changed>

r2954 | bdb | 2015-07-06 10:07:54 -0500 (Mon, 06 Jul 2015) | 1 line

Add suffix_proc option for dax 0.3.1

r2655 | yben | 2015-05-11 09:02:40 -0500 (Mon, 11 May 2015) | 1 line

Switching Modules/Processors/spiders for the version 0.3.0 of dax package (generic functions build in dax)

r1992 | yben | 2014-10-16 12:46:53 -0500 (Thu, 16 Oct 2014) | 2 lines

Removing MASIMATLAB_PATH called from dax and instead getting path from VUIIS_path_settings.py in processors/ Adding all the path to processors/VUIIS_path_settings.py for each imaging software used.

r1979 | yben | 2014-10-10 15:07:51 -0500 (Fri, 10 Oct 2014) | 2 lines

Adding “-singleCompThread” to every matlab called from regular spiders. Fixing bedpost problem (using fa.nii instead of dti)

r1903 | yben | 2014-08-15 11:42:56 -0500 (Fri, 15 Aug 2014) | 2 lines

Final commit to work with the new package dax. Fix some imports for modules/spiders/processors/Xnat_tools (fs)

r1901 | yben | 2014-08-15 09:05:31 -0500 (Fri, 15 Aug 2014) | 4 lines

Important Commit: 1) Adding new spiders using the new template 2) Switching old spiders to new template 3) Using new package dax

r1581 | yben | 2014-03-12 11:31:31 -0500 (Wed, 12 Mar 2014) | 1 line

error() -> set_error() typo error fixed

r1575 | yben | 2014-03-11 11:46:31 -0500 (Tue, 11 Mar 2014) | 1 line

Adding some line in spider (python code) to check the output before setting to complete

r1528 | yben | 2014-02-25 11:33:31 -0600 (Tue, 25 Feb 2014) | 3 lines

Removing hard coded path in Multi dtiqa and adding it in the processor and the spider. It doesn’t change the process. For dtiQA_v2_1, export path in the spider. Default in the matlab for MASIFUSION,ART,MIPAV,DTIQA_ATLAS

r1419 | yben | 2014-02-03 10:30:44 -0600 (Mon, 03 Feb 2014) | 1 line

Error on the tgz filename. Using the nifti fullpath instead of the basename to create the TGZ.

r1364 | masispider | 2014-01-27 08:26:42 -0600 (Mon, 27 Jan 2014) | 1 line

fixing dtiqa saving the FA map

r1343 | yben | 2014-01-22 15:57:57 -0600 (Wed, 22 Jan 2014) | 1 line

Fixing Spider name in the output files in the upload directory (depends on the spider script name).

r1334 | masispider | 2014-01-22 09:10:50 -0600 (Wed, 22 Jan 2014) | 1 line

debugging spider dtiqa multi

r1333 | yben | 2014-01-21 17:01:55 -0600 (Tue, 21 Jan 2014) | 2 lines

debugging the multi scans dtiqa spider/procesor

r1332 | masispider | 2014-01-21 16:40:46 -0600 (Tue, 21 Jan 2014) | 1 line

Fixed the spider dtiQA on Multi scans session

r1331 | yben | 2014-01-21 16:05:48 -0600 (Tue, 21 Jan 2014) | 1 line

Debugging ...

r1326 | yben | 2014-01-20 11:14:57 -0600 (Mon, 20 Jan 2014) | 1 line

Debugging ...

r1321 | yben | 2014-01-20 10:29:20 -0600 (Mon, 20 Jan 2014) | 2 lines

debugging the multi scans dtiqa spider/procesor

r1320 | yben | 2014-01-20 09:44:06 -0600 (Mon, 20 Jan 2014) | 1 line

adding dtiqa multi in svn repository

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